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Tutorial/pybioclip#1

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CZ2128-Delta merged 21 commits into
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tutorial/pybioclip
Jun 18, 2026
Merged

Tutorial/pybioclip#1
CZ2128-Delta merged 21 commits into
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tutorial/pybioclip

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@thompsonmj

@thompsonmj thompsonmj commented Jun 16, 2026

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thompsonmj and others added 14 commits June 15, 2026 18:20
Add docs/tutorials/notebooks/pybioclip.ipynb covering Tree of Life
classification, custom-label classification, and image embeddings with
pybioclip, and wire the Open In Colab badge into the pybioclip section of
docs/index.md. Also strip non-ASCII typography (em/en dashes, arrows)
from index.md and README.md for plain-ASCII source.

This is a human-in-the-loop, AI-generated tutorial draft intended for
further human review and refinement. The notebook's "Your turn" hands-on
prompts are still TBD.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
@thompsonmj thompsonmj requested a review from NetZissou June 18, 2026 22:31
@thompsonmj

thompsonmj commented Jun 18, 2026

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Should be stable now:
https://imageomics.github.io/evolution-workshop-2026/pr-1/

Note the pybioclip notebook is in this PR, so its link will resolve from the site when merged into main.

Its current state can be viewed here: https://colab.research.google.com/github/Imageomics/evolution-workshop-2026/blob/tutorial%2Fpybioclip/docs/tutorials/notebooks/pybioclip.ipynb

@thompsonmj thompsonmj requested a review from CZ2128-Delta June 18, 2026 22:45
@CZ2128-Delta CZ2128-Delta merged commit 61865f5 into main Jun 18, 2026
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github-actions Bot added a commit that referenced this pull request Jun 18, 2026
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2 participants