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Update to topics fcs#11522

Merged
SPPearce merged 4 commits into
nf-core:masterfrom
LouisLeNezet:fcs
May 6, 2026
Merged

Update to topics fcs#11522
SPPearce merged 4 commits into
nf-core:masterfrom
LouisLeNezet:fcs

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@LouisLeNezet

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PR checklist

Closes #11472

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@LouisLeNezet LouisLeNezet self-assigned this May 4, 2026
@SPPearce SPPearce merged commit d0a30b6 into nf-core:master May 6, 2026
63 of 68 checks passed
@SPPearce

SPPearce commented May 6, 2026

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Force merging because the linting is failing based on the image being in docker.

@LouisLeNezet LouisLeNezet deleted the fcs branch June 1, 2026 10:37
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Migration to topic channels: fcs/fcsgx

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